Some useful links first:
Thesis submission and examination
http://www.graduateschool.bham.ac.uk/rsa/
How to write your thesis
http://www.ldeo.columbia.edu/~martins/sen_sem/thesis_org.html
How to write up a PhD dissertation (for computer scientists and alike)
http://www.cs.jhu.edu/~jason/advice/how-to-write-a-thesis.html
Writing tips
http://lorien.ncl.ac.uk/ming/dept/tips/writing/writeindex.htm
How to write a PhD thesis
http://www.phys.unsw.edu.au/~jw/thesis.html
